Calculating Analysis Options
Collection of functions that resolves options for analysis functions organized by the subject matter they may be relevant to.
Chromatography
AnalyzePeaksOptions -- Returns resolved options for calling AnalyzePeaks function to pick Peaks from protocol or data object.
AnalyzeCompositionOptions -- Resolves options for analysis of chemical composition of chromatogram peaks in HPLC protocol.
AnalyzeFractionsOptions -- Returns resolved options for the analysis of fractions when it is called on input protocol or data.
AnalyzeLadderOptions -- Returns resolved options for fitting the standard curve function to molecular size for peaks or a given data object.
Spectroscopy
AnalyzePeaksOptions -- Returns resolved options for calling AnalyzePeaks function to pick Peaks from protocol or data object.
AnalyzeAbsorbanceQuantificationOptions -- Returns resolved options for calling AnalyzeAbsorbanceQuantification function on quantification protocols.
AnalyzeTotalProteinQuantificationOptions -- Returns resolved options for calling AnalyzeTotalProteinQuantification function to calculate total protein calculation based on total protein quantification assay data.
AnalyzeDynamicLightScatteringOptions -- Returns resolved options for calling AnalyzeDynamicLightScattering function to calculate key parameters from input protocol or data object.
AnalyzeDynamicLightScatteringLoadingOptions -- Returns resolved options for calling AnalyzeDynamicLightScatteringLoading function to perform threshold analysis of correlation curve data on dynamic light scattering data.
PCR
AnalyzeQuantificationCycleOptions -- Resolves options for calculating the quantification cycle of each applicable amplification curve for specified provided quantitative polymerase chain reaction (qPCR) protocol or data object.
AnalyzeCopyNumberOptions -- Returns resolved options to calculate the copy number for each quantification cycle based on the standard curve of quantification cycle vs Log10 copy number.
Bioassays
AnalyzeBindingKineticsOptions -- Returns resolved options for calling AnalyzeBindingKinetics function to solve the kinetic association and dissociation rates.
AnalyzeBindingQuantitationOptions -- Returns resolved options for calling AnalyzeBindingQuantitation function to determine the concentration of the analyte.
AnalyzeEpitopeBinningOptions -- Returns resolved options for the classification of antibodies by their interaction with a given antigen from biolayer interferometry data.
AnalyzeDNASequencingOptions -- Returns the resolved options for a DNA sequencing experiment when run on a set of sequencing data.
Microscopy
AnalyzeMicroscopeOverlayOptions -- Returns resolved options for AnalyzeMicroscopeOverlay when called on microscopy data objects.
AnalyzeCellCountOptions -- Returns resolved options for AnalyzeCellCount when it called on Microscopic Data or images.
Quantification
AnalyzeAbsorbanceQuantificationOptions -- Returns resolved options for calling AnalyzeAbsorbanceQuantification function to calculate concentration of an analyte using Beer's Law.
AnalyzeTotalProteinQuantificationOptions -- Returns resolved options for AnalyzeTotalProteinQuantification when it is called on input protocol.
AnalyzeCopyNumberOptions -- Returns resolved options for calling AnalyzeCopyNumber function to calculate the estimated copy number of a given gene sequence based on qPCR data or Qualification Cycle Analysis.
AnalyzeQuantificationCycleOptions -- Returns resolved options for calling AnalyzeQuantificationCycle function to calculate the Quantification Cycle (Cq) which is the inflection point in the amplification curve of qPCR data.
AnalyzePeaksOptions -- Returns resolved options for calling AnalyzePeaks function to pick Peaks from protocol or data object.
AnalyzeBindingQuantitationOptions -- Returns resolved options for calling AnalyzeBindingQuantitation function to determine the concentration of the analyte.
Thermodynamics
AnalyzeThermodynamicsOptions -- Resolves options to call AnalyzeThermodynamics function based on the input.
AnalyzeParallelLineOptions -- Resolves options to call AnalyzeParallelLine function which calculate the relative potency ratio between EC50 values in teo dose-response fitted curves.
Kinetics
AnalyzeKineticsOptions -- Returns resolved options for solving for the kinetic rates by AnalyzeKinetics.
AnalyzeBindingKineticsOptions -- Returns resolved options for calling AnalyzeBindingKinetics function to solve the kinetic association and dissociation rates.
Analytical And Physical Chemistry
AnalyzeMeltingPointOptions -- Returns resolved options for calculating the melting temperature from melting curves by AnalyzeMeltingPoint.
AnalyzeCriticalMicelleConcentrationOptions -- Resolves options to call AnalyzeCriticalMicelleConcentration based on the input data or protocol.
AnalyzeBubbleRadiusOptions -- Returns resolved options for analyzing the bubble radius in the video obtained while performing dynamic foam analysis.
Numeric Analysis
AnalyzeFitOptions -- Resolves options to call AnalyzeFit function to fit on input data, with all automatic options resolved to fix values.
AnalyzeSmoothingOptions -- Returns resolved options for AnalyzeSmoothing when it is called on input data.
AnalyzeStandardCurveOptions -- Returns resolved options for AnalyzeStandardCurve when it is called on input data and standard data.
AnalyzeClustersOptions -- Returns resolved options for partitioning the data points into distinct similarity groups.