Model[Item, BLIProbe]
Model information for a fiber-optic bio-sensor which is used in Bio-Layer Interferometry (BLI) experiments.
Organizational Information
Name
Name of this Object.
Format: Single
Class: String
Programmatic Pattern: _String
Pattern Description: A string.
ID
ID of this Object.
Format: Single
Class: String
Programmatic Pattern: _String
Pattern Description: The ID of this object.
Object
Object of this Object.
Format: Single
Class: Expression
Programmatic Pattern: Model[Item, BLIProbe, _String]
Pattern Description: The object reference of this object.
Type
Type of this Object.
Format: Single
Class: Expression
Programmatic Pattern: Model[Item, BLIProbe]
Pattern Description: Model[Item, BLIProbe]
Notebook
Notebook this object belongs to.
Format: Single
Class: Link
Programmatic Pattern: _Link
Pattern Description: An object of that matches ObjectP[Object[LaboratoryNotebook]].
Relation: Object[LaboratoryNotebook][Objects]
Objects
Objects that represent instances of this model.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Object[Item, BLIProbe][Model]
Deprecated
Indicates if this item model is historical and no longer used in the lab.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Authors
The person who created this item model.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Object[User]
Synonyms
List of possible alternative names this model goes by.
Format: Multiple
Class: String
Programmatic Pattern: _String
UNII
Unique Ingredient Identifier of compounds based on the unified identification scheme of FDA.
Format: Single
Class: String
Programmatic Pattern: _String
Item Specifications
InstrumentSchematics
Detailed drawings of the instrument that explain its capabilities and limitations.
Format: Multiple
[[1]] Schematic
Header: Schematic
Class: Link
Programmatic Pattern: _Link
Relation: Object[EmeraldCloudFile]
[[2]] Caption
Header: Caption
Class: String
Programmatic Pattern: _String
ImageFile
A photo of this model of container.
Format: Single
Class: Link
Programmatic Pattern: _Link
Relation: Object[EmeraldCloudFile]
ImageFileScale
The scale relating pixels of ImageFile to real world distance.
Format: Single
Class: Real
Unit: 1 Pixels per centimeter
Programmatic Pattern: 0 Pixel
Hold[GreaterEqualP[-----------]]
Centi Meter
PreferredCamera
Indicates the recommended camera type for taking an image of an object of this model.
Format: Single
Class: Expression
Programmatic Pattern: CameraCategoryP
Storage Information
FluidTransport
Indicates that this item is stored in a storage buffer and will be wet when retrieved from storage.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Expires
Indicates if items of this model expire after a given amount of time.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
ShelfLife
The length of time after DateCreated that items of this model are recommended for use before they should be discarded.
Format: Single
Class: Real
Unit: 1 day
Programmatic Pattern: GreaterP[0 Day]
UnsealedShelfLife
The length of time after DateUnsealed that items of this model are recommended for use before they should be discarded.
Format: Single
Class: Real
Unit: 1 day
Programmatic Pattern: GreaterP[0 Day]
LightSensitive
Determines if the item reacts or degrades in the presence of light and should be stored in the dark to avoid exposure.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
DefaultStorageCondition
The condition in which items of this model are stored when not in use by an experiment; this condition may be overridden by the specific storage condition of any given item.
Format: Single
Class: Link
Programmatic Pattern: _Link
Relation: Model[StorageCondition]
TransportChilled
Indicates if items of this model should be refrigerated during transport when used in experiments.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
TransportWarmed
The temperature that items of this model should be incubated at while transported between instruments during experimentation.
Format: Single
Class: Real
Unit: 1 degree Celsius
Programmatic Pattern: GreaterP[0 Kelvin]
Plumbing Information
Connectors
Specifications for the ends of this plumbing component that may connect to other plumbing components or instrument ports.
Format: Multiple
[[1]] Connector Name
Header: Connector Name
Class: String
Programmatic Pattern: ConnectorNameP
[[2]] Connector Type
Header: Connector Type
Class: Expression
Programmatic Pattern: ConnectorP
[[3]] Thread Type
Header: Thread Type
Class: Expression
Programmatic Pattern: ThreadP|None
[[4]] Inner Diameter
Header: Inner Diameter
Class: Real
Unit: 1 inch
Programmatic Pattern: GreaterP[0 Inch]
[[5]] Outer Diameter
Header: Outer Diameter
Class: Real
Unit: 1 inch
Programmatic Pattern: GreaterP[0 Inch]
[[6]] Gender
Header: Gender
Class: Expression
Programmatic Pattern: ConnectorGenderP|None
Size
The length of this item, in the direction of fluid flow.
Format: Single
Class: Real
Unit: 1 meter
Programmatic Pattern: GreaterEqualP[0 Meter]
DeadVolume
The fluid volume that can be contained in this item component when used as part of the plumbing.
Format: Single
Class: Real
Unit: 1 milliliter
Programmatic Pattern: GreaterP[0 Milli Liter]
FluidCategory
Type of fluids that can be used with this item component when used as part of the plumbing.
Format: Multiple
Class: Expression
Programmatic Pattern: FluidCategoryP
Wiring Information
WiringConnectors
Specifications for the ends of the wiring connectors on this Item model that may plug into and conductively connect to other items, parts or instruments.
Format: Multiple
[[1]] Wiring Connector Name
Header: Wiring Connector Name
Class: String
Programmatic Pattern: WiringConnectorNameP
[[2]] Wiring Connector Type
Header: Wiring Connector Type
Class: Expression
Programmatic Pattern: WiringConnectorP
[[3]] Gender
Header: Gender
Class: Expression
Programmatic Pattern: ConnectorGenderP|None
WiringLength
The length of this item, in the direction of the electricity flow.
Format: Single
Class: Real
Unit: 1 centimeter
Programmatic Pattern: GreaterP[0 Centimeter]
WiringDiameters
For each member of WiringConnectors, its effective conductive diameter.
Format: Multiple
Class: Real
Unit: 1 millimeter
Programmatic Pattern: GreaterP[0 Millimeter]
Dimensions & Positions
Dimensions
The external dimensions of this model of item in it's packaged form.
Format: Single
[[1]] X Direction (Width)
Header: X Direction (Width)
Class: Real
Unit: 1 meter
Programmatic Pattern: GreaterEqualP[0 Meter]
[[2]] Y Direction (Depth)
Header: Y Direction (Depth)
Class: Real
Unit: 1 meter
Programmatic Pattern: GreaterEqualP[0 Meter]
[[3]] Z Direction (Height)
Header: Z Direction (Height)
Class: Real
Unit: 1 meter
Programmatic Pattern: GreaterEqualP[0 Meter]
Footprint
Standard form factor of the exterior bottom portion of this model of item used to seat the item in an open position.
Format: Single
Class: Expression
Programmatic Pattern: FootprintP
MaterialDimensions
The actual dimensions of this material in it's unpackaged form.
Format: Single
[[1]] X Direction (Width)
Header: X Direction (Width)
Class: Real
Unit: 1 meter
Programmatic Pattern: GreaterEqualP[0 Meter]
[[2]] Y Direction (Length)
Header: Y Direction (Length)
Class: Real
Unit: 1 meter
Programmatic Pattern: GreaterEqualP[0 Meter]
CuttableWidth
Indicates if this items length can but cut lengthwise, decreasing the width of the item.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
CuttableLength
Indicates if this items length can but cut crosswise, decreasing the length of the item.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
Inventory
ProductDocumentationFiles
PDFs of any product documentation provided by the supplier of this item model.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Object[EmeraldCloudFile]
Products
Products ordering information for this model of part.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Object[Product][ProductModel]
KitProducts
Products ordering information for this model if this model is part of one or more kits.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
MixedBatchProducts
Products ordering information for this model if this model is part of one or more mixed batches.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
ServiceProviders
Service companies that provide synthesis of this model as a service.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
RentByDefault
Indicates if this item should be 'rented' from the ECL rather than purchased when it is needed during the course of an experiment.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
Compatibility
PreferredWashBin
Indicates the recommended bin for dishwashing this container.
Format: Single
Class: Link
Programmatic Pattern: _Link
Relation: Model[Container, WashBin]
WettedMaterials
The materials of which this part is made that may come in direct contact with fluids.
Format: Multiple
Class: Expression
Programmatic Pattern: MaterialP
IncompatibleMaterials
A list of materials that would be damaged if wetted by this model.
Format: Multiple
Class: Expression
Programmatic Pattern: MaterialP | None
LiquidHandlerIncompatible
Indicates if this item cannot be reliably aspirated or dispensed on an automated liquid handling robot.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Health & Safety
Sterile
Indicates that this model of item arrives sterile from the manufacturer.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Sterilized
Indicates if this model of item is sterilized by autoclaving upon receiving and, if it is reusable, after being cleaned before it is reused.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
SterilizationBag
Indicates if this model of item is sealed in an autoclave bag before autoclaving. The bag protects its sterility until it is used.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
NucleaseFree
Indicates if this model of item is tested to be not contaminated with DNase and RNase by the manufacturer.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
NucleicAcidFree
Indicates if this model of item is tested to be not contaminated with DNA and RNA by the manufacturer.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
PyrogenFree
Indicates if this model of item is tested to be not contaminated with endotoxin by the manufacturer.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Radioactive
Indicates if items of this model emit substantial ionizing radiation.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Ventilated
Indicates if items of this model must be handled in a ventilated enclosures.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Flammable
Indicates if items of this model are easily set aflame under standard conditions.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Acid
Indicates if items of this model are strong acids (pH <= 2) and require dedicated secondary containment during storage.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Base
Indicates if items of this model are strong bases (pH >= 12) and require dedicated secondary containment during storage.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Pyrophoric
Indicates if items of this model can ignite spontaneously upon exposure to air.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
WaterReactive
Indicates if items of this model react spontaneously upon exposure to water.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Fuming
Indicates if items of this model emit fumes spontaneously when exposed to air.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
Aqueous
Indicates if items of this model are a solution in water.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
HazardousBan
Indicates if items of this model are currently banned from usage in the ECL because the facility isn't yet equiped to handle them.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
ExpirationHazard
Indicates if items of this model become hazardous once they are expired and therefore must be automatically disposed of when they pass their expiration date.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
ParticularlyHazardous Substance
Indicates if special precautions should be taken in handling this substance as indicated by the MSDS classification.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
DrainDisposal
Indicates if items of this model may be safely disposed down a standard drain.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
MSDSRequired
Indicates if an MSDS is applicable for this model.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
MSDSFile
PDF of the models MSDS (Materials Saftey Data Sheet).
Format: Single
Class: Link
Programmatic Pattern: _Link
Relation: Object[EmeraldCloudFile]
NFPA
The National Fire Protection Association (NFPA) 704 hazard diamond classification for the substance.
Format: Single
Class: Expression
Programmatic Pattern: NFPAP
DOTHazardClass
The Department of Transportation hazard classification of the substance.
Format: Single
Class: String
Programmatic Pattern: DOTHazardClassP
BiosafetyLevel
The Biosafety classification of the substance.
Format: Single
Class: Expression
Programmatic Pattern: BiosafetyLevelP
Qualifications & Maintenance
MaintenanceFrequency
A list of the maintenance models for this part model and their required frequencies.
Format: Multiple
[[1]] Maintenance Model
Header: Maintenance Model
Class: Link
Programmatic Pattern: _Link
Relation: Model[Maintenance][Targets]
[[2]] Frequency
Header: Frequency
Class: Real
Unit: 1 day
Programmatic Pattern: GreaterP[0 Day]
QualificationFrequency
A list of the Qualification models for this part model and their required frequencies.
Format: Multiple
[[1]] Qualification Model
Header: Qualification Model
Class: Link
Programmatic Pattern: _Link
Relation: Model[Qualification][Targets]
[[2]] Frequency
Header: Frequency
Class: Real
Unit: 1 day
Programmatic Pattern: GreaterP[0 Day]
SupportedInstruments
A list of instruments for which this model is replacement part or an accompanying accessory.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
CleaningMethod
Indicates the type of cleaning that is employed for this part before reuse.
Format: Single
Class: Expression
Programmatic Pattern: CleaningMethodP
ContinuousOperation
Indicates if the item is required to operate continuously in the lab, regardless of if it is InUse by a specific protocol.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
Operating Limits
MaxNumberOfHours
The amount of time this item can be used during experiments before performance is expected to degrade and the item should be replaced.
Format: Single
Class: Real
Unit: 1 hour
Programmatic Pattern: GreaterP[0 Hour]
MaxNumberOfUses
The maximum number of uses for which this item is expected to perform before performance is expected to degrade and the item should be replaced.
Format: Single
Class: Integer
Programmatic Pattern: GreaterP[0, 1]
IntendedAnalyte
The types of species that may interact directly with the probe surface. Note that it some cases the probe surface may be modified to target a different set of analytes.
Format: Multiple
Class: Expression
Programmatic Pattern: BLIAnalyteTypeP
RecommendedApplication
The types of BLI experiments that the probe is intended for, as stated by the manufacturer in the product documentation.
Format: Multiple
Class: Expression
Programmatic Pattern: BLIApplicationsP
MaximumBioLayerThickness
The maximum bio-layer thickness that can be accurately measured by this probe.
Format: Single
Class: Real
Unit: 1 nanometer
Programmatic Pattern: GreaterP[0 Nanometer]
QuantitationDynamicRange
The range of analyte concentration for which this probe functions optimally for a given compatible instrument. Dynamic range might vary for different background conditions and acquisition rates, and is based on testing of intended analyte molecules. The values are given as {instrument, lowerbound, upperbound}.
Format: Multiple
[[1]] Minimum concentration
Header: Minimum concentration
Class: Real
Unit: 1 microgram per milliliter
[[2]] Maximum concentration
Header: Maximum concentration
Class: Real
Unit: 1 microgram per milliliter
QuantitationRegeneration
Indicates if the probe can be regenerated to perform multiple successive quantitation measurements. AnalyteDependent indicates that probe regeneration depends on the species which is associated to the probe surface, and that any assays using regeneration should be user validated. Regeneration returns the probe surface to the original condition.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP | AnalyteDependent | ProteinDependent
KineticsRegeneration
Indicates if the probe can be regenerated to perform multiple successive kinetics measurements. AnalyteDependent indicates that probe regeneration depends on the species which is associated to the probe surface, and that any assays using regeneration should be user validated. Regeneration returns the probe surface to the original condition.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP | AnalyteDependent | ProteinDependent
RegenerationSolutions
Indicates one or more solutions which can be used to regenerate the probe surface. Regeneration returns the probe surface to the original condition.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Model[Sample]
RegenerationDuration
The recommended amount of time for which the bio-probe is immersed in regeneration solution. Regeneration returns the probe surface to the original condition.
Format: Single
Class: Real
Unit: 1 second
Programmatic Pattern: GreaterP[0 Second]
RegenerationShakeRate
The recommended shake-rate while the bio-probe is immersed in regeneration solution. Regeneration returns the probe surface to the original condition.
Format: Single
Class: Real
Unit: 1 hertz
Programmatic Pattern: RangeP[100 Hertz, 1500 Hertz]
RegenerationCycles
The recommended number of regeneration cycles, which is the number of times that the bio-probe is exposed to the regeneration solution. Regeneration returns the probe surface to the original condition.
Format: Single
Class: Integer
Programmatic Pattern: GreaterP[0, 1]
Physical Properties
Density
Known density of items of this model at room temperature.
Format: Single
Class: Real
Unit: 1 gram per milliliter
Programmatic Pattern: 0 Gram
Hold[GreaterP[------ Milli]]
Liter
pH
The logarithmic concentration of hydrogen ions of the substance at room temperature.
Format: Single
Class: Real
Programmatic Pattern: RangeP[0, 14]
ExtinctionCoefficients
A measure of how strongly this chemical absorbs light at a particular wavelength.
Format: Multiple
[Wavelength]
Header: Wavelength
Class: VariableUnit
[ExtinctionCoefficient]
Header: ExtinctionCoefficient
Class: VariableUnit
State
The physical state of the item when well solvated at room temperature and pressure.
Format: Single
Class: Expression
Programmatic Pattern: ModelStateP
Reusability
Indicates that this item can be used repeatedly.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
ProbeSurfaceComposition
The chemical or biological species which compose the coating on the bio-probe surface.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Model[Molecule]
Racked
Indicates whether the probes are pre-loaded into racks with defined probe positions.
Format: Single
Class: Expression
Programmatic Pattern: BooleanP
General
Protocols
All protocols that used this item at any point during their execution in the lab.
Format: Multiple
Class: Link
Programmatic Pattern: _Link
Relation: Object[Protocol][SamplesIn]
Sample Preparation
Preparable
Indicates if items of this model may be prepared as needed during the course of an experiment.
Format: Single
Class: Boolean
Programmatic Pattern: BooleanP
Last modified on Mon 26 Sep 2022 15:43:55