ecl-logo Documentation
ECL`

PlotProbeConcentration

PlotProbeConcentration[ProbeSimulation]Plot

plots probe accessibility along the target sequence in the provided ProbeSimulation object.

Details

    Input
    Output
    Frame Options
    Grid Options
    Image Format Options
    Plot Labeling Options
    Plot Range Options
    Plot Style Options
    Probes Options
    General Options

Examples

open allclose all

Basic Examples  (2)

Given the output from SimulateProbeSelection, the funcion plots the probe accessibility along a target, arrows represent selected top probes with their rank indicated:

The function can also work on Object[Simulation, PrimerSet] by plotting out forward primers (left arrows), reverse primers (right arrows) and Beacons (horizontal lines):

Options  (1)

TopProbes  (1)

Displays the top N number of selected probes based on their correctly bound concentrations, N defaults to 10:

Messages  (1)

PrimersNotFound  (1)

Return an error if the ForwardPrimers or PrimerProbeSets fields in the input object are empty:

Last modified on Fri 19 Sep 2025 09:57:01