PlotAbsorbanceQuantification Documentation

Plot absorbance spectroscopy data from a link:

Plot the Object[Data,AbsorbanceSpectroscopy] associated with an Object[Analysis,AbsorbanceQuantification] object:

Plot the Object[Data,AbsorbanceSpectroscopy] associated with an protocol[AbsorbanceQuantification] object:

PlotCellCount Documentation

Plot a list of cell counts:

Plot cell count from a link:

Plot components of over a microscope image:

PlotCopyNumber Documentation

Given a copy number analysis object, creates a plot for the analysis object:

Given multiple copy number analysis objects, creates a plot for the analysis objects:

PlotFit Documentation

Plot a 2-D fit:

Plot a fit and its data:

Plot a fit object:

Plot the output of the fit function:

PlotFractions Documentation

FractionLabels default to well positions when no sample information available:

Plot fractions analysis:

Plot fractions analysis from a link:

Plot fractions analysis with Fractions field:

PlotGating Documentation

Plot a Gating object:

Plot a list of gated data:

Plot gating from a link:

PlotKineticRates Documentation

Plot fitted kinetc rates:

PlotLadder Documentation

Plot a ladder analysis link:

Plot standard object:

PlotMeltingPoint Documentation

Plot a melting point link:

Plot a melting point link:

Plot a melting points analysis info object:

PlotMicroscopeOverlay Documentation

Plot a microscope overlay:

Plot a microscope overlay from a link:

PlotPeaks Documentation

Plot peak analysis from a link:

Plot the areas of a set of peak purities as a labeled pie chart:

Plot the peak purity from an Object[Analysis,Peaks] Object as a pie chart:

Plot the peaks associated with a single Object[Data,Chromatography] object as a pie chart of peak purity:

Plot the peaks associated with a single Object[Data,Western] object as a pie chart of peak purity:

PlotQuantificationCycle Documentation

Given a quantification cycle analysis object, creates a plot for the analysis object:

Given multiple quantification cycle analysis objects, creates a plot for the analysis objects:

PlotSmoothing Documentation

Plotting the smoothing analysis for a chromatography data object:

Plotting the smoothing analysis of a list of coordinates:

Plotting the smoothing analysis results of a spiral curve:

PlotStandardCurve Documentation

Add a frame and a title to the plot of a standard curve analysis:

Given a list of standard curve analyses, generate a list of standard curve plots:

Plot the results of a standard curve analysis:

PlotThermodynamics Documentation

Can take any PlotFit option:

Plot a thermodynamics analysis object:

Plot a thermodynamics analysis object with only fitted curve and no errorbars:

PlotAbsorbanceKinetics Documentation

Plots absorbance kinetics data when given a list of XY coordinates representing the spectra:

Plots absorbance kinetics data when given an AbsorbanceKinetics data link:

Plots multiple sets of data on the same graph:

Plots the absorbance trajectory in an AbsorbanceKinetics data object:

PlotAbsorbanceSpectroscopy Documentation

Plots absorbance spectroscopy data when given a list of XY coordinates representing the spectra:

Plots absorbance spectroscopy data when given an AbsorbanceSpectroscopy data link:

Plots absorbance spectroscopy data when given an AbsorbanceSpectroscopy data object:

Plots multiple sets of data on the same graph:

PlotAbsorbanceThermodynamics Documentation

Plot only the cooling curve from the data object:

Plot raw cooling curve data:

Plots absorbance thermodynamics object in a link:

Plots all primary data fields present in the absorbance thermodynamics data object:

Plots the Melting and Cooling curve when both are present in the absorbance thermodynamics data object:

PlotAgarose Documentation

Given an AgaroseGelElectrophoresis data object, creates a plot for the SampleElectropherogram:

Plot a AgaroseGelElectrophoresis data in a link:

Plot AgaroseGelElectrophoresis data after calling AnalyzePeaks:

PlotBindingQuantitation Documentation

Given an analyzed Object[Data,BioLayerInterferometry], PlotBindingQuantitation returns an plot:

Given an Object[Analysis,BindingQuantitation], PlotBindingQuantitation returns an plot:

PlotBioLayerInterferometry Documentation

Given an analyzed Object[Data,BioLayerInterferometry] with kinetics data, PlotBioLayerInterferometry returns an plot:

Given an Object[Protocol,BioLayerInterferometry] with associated kinetics data, PlotBioLayerInterferometry returns plot for all associated data objects:

Given an unanalyzed Object[Data,BioLayerInterferometry] with kinetics data, PlotBioLayerInterferometry returns an plot:

PlotChromatography Documentation

Generate an interactive plot of the data in the chromatography object:

Overlay several chromatograms in an interactive plot:

Plots absorbance data during an LCMS run:

PlotCrossFlowFiltration Documentation

Plot the results of an ExperimentCrossFlowFiltration using a data object as input:

Plot the results of an ExperimentCrossFlowFiltration using a list of data objects as input:

Plot the results of an ExperimentCrossFlowFiltration using a protocol object as input:

PlotConductivity Documentation

Plot multiple conductivity data on the same plot:

Plots conductivity data when given a conductivity data object:

Plots conductivity data when given a conductivity data object when given a data link:

PlotCriticalMicelleConcentration Documentation

Given an analyzed Object[Data,SurfaceTension], PlotCriticalMicelleConcentration returns an plot:

Given an Object[Analysis,CriticalMicelleConcentration], PlotCriticalMicelleConcentration returns an plot:

PlotDifferentialScanningCalorimetry Documentation

Plot DifferentialScanningCalorimetry data:

Plot DifferentialScanningCalorimetry data using the raw data:

PlotDynamicLightScattering Documentation

Given a DynamicLightScattering data object, creates a plot for the MassDistribution if AssayType is SizingPolydispersity, ZAverageDiameters if the AssayType is IsothermalStability, KirkwoodBuffIntegral if the AssayType is G22, and PolydispersityIndicies if the AssayType is B22kD:

Return a dynamic figure when Output->Preview:

Return a list of resolved options when Output->Option:

Return a list of resolved options when Output->Tests:

PlotEpitopeBinning Documentation

Returns a graph showing the binned antibodies:

Returns a graph showing the binned antibodies:

PlotFlowCytometry Documentation

Compare mutliple flow cytometry data sets:

Plot flow cytometry data:

Plot flow cytometry data in a link:

PlotFluorescenceIntensity Documentation

Compare intensities across datasets using a BoxWhiskerChart:

Plot a histogram of intensities:

Plot a histogram of intensities from links:

Input Type  (1)

Grouped lists of info packets:

PlotFluorescenceKinetics Documentation

Plot multiple data objects:

Plot raw data downloaded from an object:

Plot the fluorescence trajectory and temperature trace of the data of interest:

Plot the fluorescence trajectory for a given data object:

PlotFluorescenceSpectroscopy Documentation

Plot multiple data objects:

Plot the emission spectrum for a given data object:

PlotFluorescenceThermodynamics Documentation

Plot FluorescenceThermodynamics object in a link:

Plot the data from a FluorescenceThermodynamics object:

PlotFreezeCells Documentation

Plot the results of an ExperimentFreezeCells using a protocol object as input:

Plot the results of an FreezeCells using a data object as input:

PlotGasChromatographyMethod Documentation

Plot the values of the setiings stored in a gas chromatography method:

PlotGradient Documentation

Pass ListLinePlot options:

Plot a more complicated gradient:

Plot a simple binary gradient mixture of Buffer A and B:

PlotGradient is listable:

PlotIRSpectroscopy Documentation

Plot multiple infrared spectra on the same graph:

Plots infrared spectroscopy data when given an IRSpectroscopy data link:

Plots infrared spectroscopy data when given an IRSpectroscopy data object:

PlotLuminescenceKinetics Documentation

Plot a raw emission trajectory:

Plot multiple data objects:

Plot multiple raw emission trajectories:

Plot the luminescence trajectory and temperature trace of the data of interest:

Plot the luminescence trajectory for a given data object:

PlotLuminescenceSpectroscopy Documentation

Plot multiple data objects:

Plot the luminescence spectrum for a given data object:

PlotMassSpectrometry Documentation

Display the mass spectrum as a graphical plot:

Peak picking analysis results are automatically included on the plot:

When available, the expected molecular weight is included on the plot by default:

PlotMicroscope Documentation

Plot a microscope object in a link:

Plot hemocytometer images from a multiple Object[Data,Microscope] objects:

Plot images of Object[Sample]:

PlotNMR Documentation

Plot a group of spectra data:

Plot an NMR data in a link:

PlotNMR2D Documentation

PlotObject calls PlotNMR2D to plot the two-dimensional spectrum:

Plot the two-dimensional NMR spectrum of a single object, with a dynamic slider for adjusting the intensity threshold:

Plot the two-dimensional NMR spectrum of a single object with low enough signal that a slider does not appear. This happens if the data is so noisy and the signal is weak enough that lowering the threshold further will result in extremely high noise:

Plot the two-dimensional NMR spectrum of multiple objects:

PlotPAGE Documentation

Plot a lane along with its corresponding standard:

Plot a PAGE data in a link:

Plot a single lane:

Plot multiple lanes with one standard:

PlotpH Documentation

Plot multiple pH data on the same plot:

Plots pH data when given a pH data object:

Plots pH data when given a pH data object when given a data link:

PlotPowderXRD Documentation

PlotObject calls PlotPowderXRD to plot the diffraction spectrum of a single object:

Plot the diffraction spectrum of a set of raw data:

Plot the diffraction spectrum of a single object:

Plot the diffraction spectrum of multiple objects:

PlotqPCR Documentation

Given a qPCR data object, creates a plot for the applicable normalized and baseline-subtracted amplification curves. If there are linked analysis objects, the quantification cycle/copy number information from the most recent analysis for each applicable wavelength pair is displayed as a tooltip:

Given multiple qPCR data objects, creates a plot for the applicable normalized and baseline-subtracted amplification curves. For each data object, if there are linked analysis objects, the quantification cycle/copy number information from the most recent analysis for each applicable wavelength pair is displayed as a tooltip:

PlotDigitalPCR Documentation

Given a DigitalPCR data object, creates a 2D scatter plot when PlotChannels are specified:

Given a DigitalPCR data object, creates a plot:

Given multiple DigitalPCR data objects, creates a plot:

PlotRamanSpectroscopy Documentation

Given a RamanSpectroscopy data object, creates plots for the AverageRamanSpectrum as well as the spectra and positions collected at each sampling position:

Plot a list of RamanSpectroscopy data objects:

PlotSensor Documentation

Plot a list of data object:

Plot a list of data packets:

Plot a list of data points:

Plot sensor data info packet:

Plot sensor data object:

PlotSurfaceTension Documentation

Given an analyzed Object[Data,SurfaceTension], PlotSurfaceTension returns an plot:

PlotTLC Documentation

Plot a TLC:

Plot a TLC object in a link:

Plot multiple TLC:

PlotVacuumEvaporation Documentation

Plot pressure and temperature data arrays:

Plot pressure and temperature data from a vacuum evaporation run:

PlotVolume Documentation

Compare distances across datasets using a BoxWhiskerChart:

Plot a histogram of distances:

Plot volume data in links:

PlotWestern Documentation

Plot the spectrum from one Object[Data,Western] Object:

Plot western data in a link:

PlotCircularDichroism Documentation

Plots circular dichroism spectroscopy data when given a list of XY coordinates representing the spectra:

Plots circular dichroism spectroscopy data when given an AbsorbanceSpectroscopy data link:

Plots circular dichroism spectroscopy data when given an AbsorbanceSpectroscopy data object:

Plots multiple sets of data on the same graph:

PlotChromatographyMassSpectra Documentation

PlotChromatographyMassSpectra is Listable:

Plot extracted ion chromatograms for specific ranges of m/z:

Plot the average mass spectra at specified elution times:

Visualize the changing mass spectrum in LCMS data as a function of elution time:

PlotDynamicFoamAnalysis Documentation

Given a DynamicFoamAnalysis data object, creates all possible plots related to the DetectionMethod:

Given multiple DynamicFoamAnalysis data objects, creates all possible plots related to the DetectionMethod):

PlotProbeConcentration Documentation

Given the output from SimulateProbeSelection, the funcion plots the probe accessibility along a target, arrows represent selected top probes with their rank indicated:

The function can also work on Object[Simulation, PrimerSet] by plotting out forward primers (left arrows), reverse primers (right arrows) and Beacons (horizontal lines):

PlotReactionMechanism Documentation

Plot a ReactionMechanism:

Plot a ReactionMechanism link:

Plot a ReactionMechanism model:

Plot a ReactionMechanism with reversible reactions:

PlotState Documentation

Alternatively a list of concentrations and species can be provided to plot state:

Given simulation object:

The function can be used to display the relative concentrations of species in a state:

The plot has additional functionality when dealing with nucleic acid states:

PlotTrajectory Documentation

Plot a kinetic simulation object:

Plot a list of simulation objects:

Plot all species in a trajectory:

Plot only species a and g:

PlotCloudFile Documentation

Create a snippet of a text file:

Create a zoomable image of a cloud file that contains an image:

Create a zoomable image of the first page of a pdf file:

PlotImage Documentation

Create a zoomable image with rulers around the frame:

Overlay several images:

PlotProtein Documentation

Visualize the structure of one model[Protein] object:

Visualize the structure of one ProteinData name of a protein:

PlotTranscript Documentation

If the structure is not available but the RNA sequence is, a raw visualization of the unfolded RNA will be returned:

Plot a transcript molecule model:

The function will provide a visualization of a model transcript by presenting its structure (if available):

PlotVirus Documentation

Display the image of one virus:

If no image is associated with the virus, the function will return Null: